In analytical chemistry, the most common technique used for the identification and quantification of chemical compounds is chromatography. Chromatography offers accuracy, precision and reproducibility for separating, identifying, and quantifying the chemical components within a sample and/or standard mixture. The two main forms are: Gas chromatography (GC) which is employed when the separation involves volatile samples and analytes, while liquid chromatography (LC) is typically employed for aqueous/organic solvent based separations.
The separation is based on the differing interactions between the analytes and the mobile phase and the stationary phase. The mobile phase (liquid, gas, or supercritical fluid) is continuously passed through the stationary phase, controlled by a system with a programmed method set by the analyst. The stationary phase does not move, it is an organic/inorganic based adsorbent material with a specifically bonded selectivity/moeity/chemistry, packed or encased within a plastic or stainless steel column.
In the early 1900s, one of the first separations recorded and published was by Mikhail Tsvet, where chromatography demonstrated the separation of plant pigments (chlorophylls and carotenoids) using calcium carbonate as the stationary phase and an organic solvent mixture of ether/ethanol as the mobile phase. To date chromatography has expanded to many different types of applications and separations with a large range of different stationary phases, columns, mobile phases and systems. Hence, the analysts must know how to select from all the different column types in order to discern and exploit them appropriately for their work associated with the identification and quantification of chemical compounds.
High pressure or high performance liquid chromatography (HPLC) is the most typical form of liquid chromatography utilizing systems with upper pressure limitations of <400 or 600 bar. The most common application of HPLC include: pharmaceuticals and biotechnology, as well as environmental science and food safety.
Developing and validating a HPLC method requires specialized knowledge, training and experience in order to successfully select the most appropriate HPLC column (stationary phase, column dimensions, particle size, column length, column internal diameter, particle technology) system, temperature, velocity and mobile phase separation conditions to separate the sample and analyte(s) of interest.
Columns are the most important attribute of a successful separation of targeted analytes - as the chemical components are resolved from one another and/or the sample matrix components based on their interactions between the stationary phase and the mobile phase within the column. In this article, we provide an overview and brief discussion of various types of HPLC columns, along with some important aspects that are key during HPLC column selection, and some common HPLC applications.
HPLC operates on the principle of separating components of a mixture based on their interactions with two phases: the mobile phase and the stationary phase. As the sample moves through the stationary phase via the mobile phase, its chemical components interact with the two phases at varying rates and the molecules separate from one another due to their differing chemical properties (logD, pKa, and/or molecular weight). The decisions related to selecting an appropriate HPLC column, begins with understanding which separation mechanisms can be best exploited to separate the compounds of interest within the sample, then with that knowledge select an appropriate stationary phase, mobile phase and the final separation conditions. All of which are important aspects to consider to effectively separate compounds of interest, particularly if the molecules are closely related to one another.
The column is the most important aspect for all separations, as this is where the stationary phase resides, and provides the main separation mechanism. The stationary phase’s tightly packed bed is enclosed/encased in a cylindrical space/tube of a specific length and internal diameter. Most columns are made out of stainless steel, while PEEK (polyetheretherketone) or glass are also used. Inert surfaces may also be employed for specific separations that are very sensitive to the column’s material where interactions can also occur.
The selection of an HPLC column, amongst all the different HPLC column types is a critical set of decisions that can significantly impact the retention, efficiency, selectivity and hence the resolution as well as the reproducibility of the separation process.
Key factors during the column selection decision include:
HPLC columns are available in a wide range of types, each designed to address specific analytical challenges depending on the nature of the compounds to be separated. Selecting the appropriate column is vital for achieving optimal separation retention, selectivity, efficiency, and resolution. The differences between HPLC columns and their stationary phases can be associated to the main separation mechanisms they utilize, such as polarity, size, or charge-based interactions. Understanding these different mechanisms that can be exploited can help ensure that the selected column will deliver the best retention, selectivity, performance and resolution for a given analysis. Below are the main modes/types of HPLC columns based on the main separation mechanism exploited:
Normal phase HPLC columns employ a polar stationary phase, typically consisting of materials like silica gel, cyano, amino, or diol types. The mobile phase, in contrast, is non-polar and commonly composed of aliphatic hydrocarbons such as hexane or cyclohexane, or aromatic hydrocarbons like toluene. The separation mechanism is primarily driven by the polarity characteristics of the analyte(s). Normal phase was the first type of LC developed and hence, the opposite separation mechanism developed afterwards, based on increasing hydrophobicity, is called ‘reversed phase’ chromatography. For normal phase separations, substances that are soluble in organic solvents are eluted in order of increasing polarity (less polar molecules having less interactions with the polar stationary phase, and the more polar analytes having greater retention with stronger interactions).
Column | Features | USP Code | Particle Size (µm) |
Pore Size (nm) |
Surface Area (m²/g) |
Inertsil Diol | First choice for normal phase mode, also for SEC | L20 | 3, 5 | 10 | 450 |
Inertsil SIL-100A | Ultra pure silica gel with 100Å pore size | L3 | 3, 5 | 10 | 450 |
Inertsil SIL-150A | Ultra pure silica gel with 150Å pore size | L3 | 5 | 15 | 320 |
Inertsil WP300 SIL | Ultra pure silica gel with 300Å pore size | L3 | 5 | 30 | 150 |
Inertsil CN-3 | Can also be used in reversed phase mode | L10 | 3, 5 | 10 | 450 |
Reversed phase HPLC columns are the most commonly used in liquid chromatography due to their wide variety of commercially available phases and effectiveness in separating a wide range of compounds. These columns feature a non-polar stationary phase, typically composed of silica particles bonded with hydrophobic bonded moieties/ligands such as alkyl chains, phenyl or cyano groups. The C18 column is named after the bonded octadecyl ligand that provides the main separation mechanism for RP HPLC columns via its 18 carbon length alkyl chain. RP columns in general are a popular choice because most analysts are trained on this technique and have more experience using these columns, and their respective mobile phases. Furthermore, RP separations provide consistent retention times for a variety of analytes separated based on their hydrophobicity, while NP is notorious for shifting retention times if care is not taken during mobile phase preparation. The mobile phase for RP is often a mixture of water, methanol, or acetonitrile; is polar, and the compounds are generally eluted in order of decreasing polarity/increasing hydrophobicity making this method ideal for analyzing non-polar and moderately polar substances.
Column | Features | USP Code | Particle Size (µm) |
Pore Size (nm) |
Surface Area (m²/g) |
|
C18 Phases | InertSustain C18 | First choice with ultra high inertness and high durability | L1 | 2, 3, 5, 10 | 10 | 350 |
InertSustain AQ-C18 | First choice for high polar compounds | L1, L96 | 1.9, 3, 5 | 10 | 350 | |
InertSustainSwift C18 | First analysis with ultra high inertness and high durability | L1 | 1.9, 3, 5 | 20 | 200 | |
InertSustain AX-C18 | Analysis of anionic highly polar compounds | L1, L78 | 3, 5 | 20 | 200 | |
InertCore Plus C18 | Ideal for analyses requiring a high number of theoretical stages | L1 | 2.6 | 9 | 200 | |
Inertsil ODS-HL | Ultra high retentivity, High-density bonding of C18 phase | L1 | 3, 5 | 10 | 450 | |
Inertsil ODS-4 | Ultra high inertness, High plate count, Medium retentivity | L1 | 2, 3, 5 | 10 | 450 | |
Inertsil ODS-4V | Inertsil ODS-4 Validated column | L1 | 3, 5 | 10 | 450 | |
Inertsil ODS-3 | Strong retentivity, Lower column backpressure, Very inert | L1 | 2, 3, 4, 5, 10 | 10 | 450 | |
Inertsil ODS-3V | Inertsil ODS-3 Validated column | L1 | 3, 5 | 10 | 450 | |
Inertsil ODS-SP | Weak retentivity, for hydrophobic compounds | L1 | 3, 5 | 10 | 450 | |
Inertsil ODS-P | High steric selectivity | L1 | 3, 5 | 10 | 450 | |
Inertsil ODS-EP | A polar functional group embedded | L1 | 5 | 10 | 450 | |
Inertsil WP300 C18 | Analysis of high molecules | L1 | 5 | 30 | 150 | |
Inertsil ODS-2 | Ultra pure silica gel is used | L1 | 5 | 15 | 320 | |
Inertsil ODS | Inertness 1st generation | L1 | 5, 10 | 10 | 350 | |
Other Reversed Phases | InertSustain C8 | First choice with ultra high inertness and high durability | L7 | 2, 3, 5 | 10 | 350 |
InertSustainSwift C8 | High inertness and high durability C8 column | L7 | 1.9, 3, 5 | 20 | 200 | |
Inertsil C8-4 | Ultra high inertness, High plate count, Low retentivity | L7 | 2, 3, 5 | 10 | 450 | |
Inertsil C8-3 | Strong retentivity, Lower column backpressure, Very inert | L7 | 2, 3, 5, 10 | 10 | 450 | |
Inertsil C8 | Ultra pure silica gel is used | L7 | 5 | 15 | 320 | |
Inertsil C4 | Low retentivity | L26 | 5 | 15 | 320 | |
Inertsil WP300 C8 | Suitable for high molecules | L7 | 5 | 30 | 150 | |
Inertsil WP300 C4 | Suitable for high molecules | L26 | 5 | 30 | 150 | |
InertSustain PFP | Extremely Strong retention of highly polar basic compounds | L43 | 3, 5 | 10 | 350 | |
InertSustain Phenylhexyl | Strong π-π interactions and hydrophobic interactions | L11 | 3, 5 | 10 | 350 | |
InertSustain Phenyl | Extremely strong π-π interactions | L11 | 2, 3, 5 | 10 | 350 | |
Inertsil Ph-3 | Strong π-π interactions | L11 | 2, 3, 5 | 10 | 450 | |
Inertsil Ph | High inertness, Weak π-π interactions | L11 | 5 | 15 | 320 | |
InertSustain Cyano | Ultra inertness and can be used in reversed phase mode | L10 | 3, 5 | 10 | 350 |
Ion exchange chromatography is a technique used to separate charged ions in a sample mixture by utilizing an ion exchange resin that facilitates different strengths of interactions based on their relative ionic affinities. The stationary phases for these types of columns, consists of bonded groups that have an ionizable functional group that can bind to specific ions, while the mobile phase will also be controlled and consists of a specific pH, ionic strength, buffer type and buffer concentration. Ion exchange columns are widely used for purifying proteins, nucleic acids, and other charged analytes, making them essential tools in bioseparations and various environmental, water, or industrial applications that can exploit ion exchange as the main separation mechanism.
Column | Features | USP Code | Particle Size (µm) |
Pore Size (nm) |
Surface Area (m²/g) |
Inertsil AX | Anion exchange column | - | 5 | 10 | 450 |
Inertsil CX | Cation exchange column | L9 | 5 | 10 | 450 |
Size exclusion chromatography, also known as gel filtration or gel permeation chromatography, separates molecules based on their size as they pass through a stationary phase, and should not provide any other competing separation mechanisms. Larger molecules are restricted and unable to access the pores of the stationary phase, hence elute first. While smaller molecules, which can access the pores, enter the porous stationary phase and are retained longer/elute later compared to relatively larger molecules. These columns are widely used in the purification and analysis of biomolecules such as proteins, enzymes, polysaccharides, nucleic acids, and other large macromolecules e.g., polymers, providing separations based solely on molecular size.
Column | Features | USP Code | Particle Size (µm) |
Pore Size (nm) |
Surface Area (m²/g) |
Inertsil WP300 Diol | High molecule SEC, Can be also used in normal phase mode | L20, L33 | 5 | 30 | 150 |
HILIC is a variant of normal phase liquid chromatography that overlaps with ion-exchange chromatography and reversed phase HPLC. HILIC columns are specifically designed to separate polar to highly polar compounds that are poorly retained in traditional reversed phase HPLC. These columns utilize hydrophilic stationary phases with reversed phase type eluents. Longer re-equilibration times are required in order to create the correct and reproducible conditions for the HILIC separation mechanisms. While there is ongoing discussion on the main separation mechanisms employed in HILIC, it is a combination of NP, ion exchange and RP, and is beneficial for the challenging separation of highly polar compounds that can’t be resolved with the other types of columns. Moreover, the highly organic conditions make it a separation technique that is highly compatible with mass spectrometry (MS) detection, where the highly volatile and ionizable separation conditions also aid in the ionization stage for improved MS detection.
Column | Features | USP Code | Particle Size (µm) |
Pore Size (nm) |
Surface Area (m²/g) |
Carbon Loading (%) | Recommended pH Range |
InertSustain Amide | First choice column for HILIC mode. | L68 | 3, 5 | 10 | 350 | 15 | 2 - 8.5 |
Inertsil Amide | Effective when the retention of high polar compounds is further strengthened. | L68 | 3, 5 | 10 | 450 | 18 | 2 - 7.5 |
Inertsil HILIC | Effective when the overall retention is to be reduced or when the separation pattern is to be changed. | L20 | 3, 5 | 10 | 450 | 20 | 2 - 7.5 |
InertSustain NH2 | First choice column for sugar analysis. | L8 | 3, 5 | 10 | 350 | 7 | 2 - 7.5 |
Inertsil NH2 | Effective for intensifying retention in sugar analysis | L8 | 3, 5 | 10 | 450 | 8 | 2 - 7.5 |
These columns feature a unique particle technology compared to the typical fully porous particle (FPP) based columns. They were introduced and are an alternative to achieve increased column efficiencies without the expense of higher backpressures. The particle architecture comprises of an inner non-porous/impermeable central core that is surrounded by a superficially porous layer. The design of SPP has been shown to reduce the resistance to mass transfer contribution, and to minimize peak broadening/dispersion with its relatively shorter diffusion path length compared to FPP (the FPP central core can be penetrated and provides inefficient zones of dispersion). This shorter diffusion path results in less longitudinal dispersion of solutes, resulting in narrower peaks and improved separation efficiency. While the impermeable core is directly related to reducing the backpressure at higher flowrates/velocities reactive to FPP of the same size.
Column | Features | USP Code | Particle Size (µm) |
Pore Size (nm) |
Surface Area (m²/g) |
InertCore Plus C18 | Ideal for analyses requiring a high number of theoretical stages | L1 | 2.6 | 9 | 200 |
Preparative Columns are specialized chromatography columns with large internal diameters, designed for the purification and isolation of large quantities of chemical compounds. These larger ID columns operate at higher flow rates relative to analytical scale columns (4.6 mm ID), the separation is focused on extracting/purifying a compound of interest and is evaluated based on yield and purity. Key applications include purifying active pharmaceutical ingredients, proteins, and natural products. While preparative HPLC is resource-intensive and requires a larger column, instrumentation, and solvent consumption. It offers increased scalability and versatility for processing significant quantities of material, making it essential for both manufacturing and production purposes/processes.
GL Sciences offers preparative columns across the following categories:
The ‘guard column’ can be thought of as the replaceable initial inlet part of the HPLC column that is susceptible to blocking and contamination from the sample and the system. Hence, instead of exposing these problems to the expensive HPLC column, placing a relatively cheaper guard column in front can extend the HPLC column’s lifetime. The guard column should be similar to the analytical column, as the guard columns are positioned before the analytical column. When the guard column becomes contaminated/blocked, it is easily replaced, instead of replacing the more expensive HPLC column. Therefore, selecting the right guard column is important.
GL Sciences provides HPLC guard columns designed to protect analytical columns and extend lifespan, ensuring optimal performance and fewer replacements.
Affinity chromatography is a specialized technique used to separate components of a mixture based on specific interactions between two molecules, such as an enzyme and its substrate or a protein and a nucleic acid. This method relies on the reversible adsorption of biomolecules through a biospecific interaction with a ligand attached to the stationary phase, which is solid, while the mobile phase is liquid. Affinity columns, designed specifically for this purpose, contain the ligand bound to the stationary phase, enabling the selective capture and purification of target molecules based on their unique biological functions or chemical structures. This makes affinity columns particularly valuable in biochemical and pharmaceutical research for isolating and purifying specific biomolecules with high precision.
Monolithic columns differ from traditional particle packed columns. There are two main types of monoliths: silica or polymer based monolith columns. Silica-based monoliths are created via a sol-gel process and then encapsulated in heat-shrink plastic to create the column, a very delicate process that has been subject to patenting. Monoliths are known for their speed and permeability advantages, reduction of mass transfer resistance, and lower back pressures at elevated flowrates compared to particle packed columns.
GL Sciences offers its MonoCap series designed with monolithic silica which eliminates the need for frits or filters at the ends of the column, thereby reducing dead volume, and has high porosity allowing high flow rates.
Chiral HPLC columns are used to separate enantiomers, crucial for industries like pharmaceuticals where mirror-image molecules can have different effects. They achieve separation through interactions between the stationary phase (chiral selectors) and the enantiomers, which move at different rates through the column. Common types include polysaccharide-based, protein-based, and ligand exchange columns. These columns are essential for applications in pharmaceuticals, agriculture, food, and forensics. Although they offer high selectivity, chiral HPLC columns can be expensive and require careful optimization to achieve effective separations.
The wide range of separation mechanisms that HPLC columns provide facilitates its use across various industries. Some of its applications include:
HPLC columns are essential in protein analysis, with specific types of stationary phases tailored to different protein properties. Reversed phase HPLC columns are ideal for peptides and denatured proteins, while size-exclusion (SEC) and ion-exchange columns offer separations of native and/or intact proteins, enabling analysis of size and charge variants. Affinity chromatography provides high specificity for target protein isolation, and HILIC columns are useful for analyzing polar and glycosylated proteins, and identifying very challenging attributes such as polar modifications.
For oligonucleotide analysis, reversed phase HPLC columns, are commonly used for separating oligonucleotides based on hydrophobicity. Ion-exchange columns are ideal for charge-based separations, often used to resolve impurities or truncated sequences. Affinity columns are used for specific purifications, while HILIC columns are useful for highly polar or modified oligonucleotides. The choice of column depends on the oligonucleotide's properties and the analytical goals, such as achieving high purity or sequence confirmation.
Explore thousands of application notes, chromatograms, and methods. Search by compound, category, phase, and more.
[Search Application Database]
In conclusion, HPLC columns are the most widely employed tool/technology in modern analytical chemistry, providing a wide range of solutions for separating simple and complex mixtures across different industries and for different applications. Selecting the appropriate column is key to a successful separation and selecting the appropriate separation mechanism(s). The different types of columns may be segregated as follows based on the separation mechanisms: normal phase, reversed phase, ion-exchange, size-exclusion, or specialized options such as affinity or chiral columns. Column selection is critical for achieving retention, selectivity, efficiency and high-resolution separations; to cater for different analytes and their respective applications from proteins and oligonucleotides to small compounds in the areas of pharmaceuticals and biotechnology to environmental monitoring and food safety. The success of HPLC in different laboratory processes lies in understanding how the stationary phase, mobile phase, and column characteristics can be exploited to enhance the separation of the compounds of interest. By leveraging the strengths of the various column types, analysts can improve the productivity and efficiency of their laboratory, driving innovation and ensuring compliance with industry standards in both research and industrial applications.
Commonly used HPLC columns can be segregated based on their main type of separation mechanism that the stationary phase offers. The main types of columns and their respective different separation conditions/modes/mechanisms: normal phase, reversed phase, hydrophilic interaction (HILIC), ion-exchange, ion chromatography, size-exclusion (SEC). Other columns also include chiral, and affinity columns. Each type of column can offer specific interactions for the analyte and the separation, to be exploited for different applications and industries. Please refer to the article for more information.
HPLC columns are commonly employed to separate chemical components of a sample and/or standard mixture based on their interactions with the stationary and mobile phases. It is the most used analytical chemistry technique due to its precision, accuracy, reproducibility for identification and quantification purposes - required for the different applications and industries they serve.
The different aspects that are important to understand related to the HPLC column: stationary phase chemistry, particle size, column dimensions/format (column length and diameter), temperature, velocity/flowrate, and particle technology. These factors determine the retention, selectivity, efficiency, resolution, and sensitivity of the HPLC column and separation of the analytes of interest in the sample.
When selecting an HPLC column, it is important to consider factors such as selectivity/bonded phase/stationary phase chemistry (to match analyte properties and exploit the appropriate separation mechanism for improved retention, selectivity, resolution). Also, column length, column diameter, particle size, particle technology (efficiency, backpressure, injection volume, analysis time, resolution).
Connect with a GL Sciences HPLC specialist today. Send us your questions, and our experts will help you find the perfect HPLC column for your application.